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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs28491855 chr4:180518488 A/G SMAD4 chr18:48554764-48611415:+ -1.84 -7.88 1.97E-10 Box Plot
ACC rs28506183 chr15:42186945 C/T PRHOXNB chr13:28552243-28562774:- 0.63 8.01 1.21E-10 Box Plot
ACC rs28633133 chr8:2322006 G/C PRHOXNB chr13:28552243-28562774:- 0.63 10 1.02E-13 Box Plot
ACC rs28636894 chr8:112931200 T/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs28664038 chr19:19981955 A/T CXorf61 chrX:115592849-115594164:- 0.59 9.1 2.42E-12 Box Plot
ACC rs28754382 chr4:180519059 G/T SMAD4 chr18:48554764-48611415:+ -1.84 -7.88 1.97E-10 Box Plot
ACC rs28760555 chr8:112950276 G/C KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs28767509 chr8:113044637 G/C KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs2932591 chr1:151953046 A/G EPGN chr4:75174190-75181024:+ -0.87 -8.17 6.79E-11 Box Plot
ACC rs2932592 chr1:151952065 G/T EPGN chr4:75174190-75181024:+ -0.87 -8.17 6.79E-11 Box Plot
ACC rs2999527 chr1:151951908 C/G EPGN chr4:75174190-75181024:+ -0.87 -8.17 6.79E-11 Box Plot
ACC rs2999529 chr1:151953840 C/T EPGN chr4:75174190-75181024:+ -0.76 -7.7 3.78E-10 Box Plot
ACC rs2999530 chr1:151954377 T/C EPGN chr4:75174190-75181024:+ -0.87 -8.17 6.79E-11 Box Plot
ACC rs2999538 chr1:151984958 A/C EPGN chr4:75174190-75181024:+ -0.76 -7.7 3.78E-10 Box Plot
ACC rs3007693 chr1:151932375 T/C EPGN chr4:75174190-75181024:+ -0.85 -7.8 2.68E-10 Box Plot